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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9621566 chr22:33187010 C/T L3MBTL2 chr22:41601209-41627275:+ -0.75 -7.49 3.45E-13 Box Plot
THCA rs9621566 chr22:33187010 C/T LDOC1L chr22:44888452-44894178:- -0.42 -6.37 4.49E-10 Box Plot
THCA rs9621566 chr22:33187010 C/T LMF2 chr22:50941378-50946120:- -0.49 -5.98 4.49E-9 Box Plot
THCA rs9621566 chr22:33187010 C/T LOC150381 chr22:46449726-46454400:+ -0.5 -6.16 1.56E-9 Box Plot
THCA rs9621566 chr22:33187010 C/T LOC284900 chr22:28315364-28404267:+ -0.44 -6.14 1.74E-9 Box Plot
THCA rs9621566 chr22:33187010 C/T LZTR1 chr22:21333751-21353327:+ -0.53 -6.03 3.24E-9 Box Plot
THCA rs9621566 chr22:33187010 C/T MAPK1 chr22:22108789-22221970:- -0.43 -6.38 4.09E-10 Box Plot
THCA rs9621566 chr22:33187010 C/T MCAT chr22:43528212-43539400:- -0.51 -7.06 5.73E-12 Box Plot
THCA rs9621566 chr22:33187010 C/T MRPL40 chr22:19419425-19423598:+ -0.48 -6.09 2.27E-9 Box Plot
THCA rs9621566 chr22:33187010 C/T MTP18 chr22:30805176-30825041:+ -0.51 -5.99 4.18E-9 Box Plot
THCA rs9621566 chr22:33187010 C/T NCAPH2 chr22:50946645-50961901:+ -0.55 -6.52 1.74E-10 Box Plot
THCA rs9621566 chr22:33187010 C/T NDUFA6 chr22:42481529-42486959:- -0.5 -6.34 5.35E-10 Box Plot
THCA rs9621566 chr22:33187010 C/T NHP2L1 chr22:42069934-42086508:- -0.56 -6.48 2.29E-10 Box Plot
THCA rs9621566 chr22:33187010 C/T NIPSNAP1 chr22:29950797-29977326:- -0.69 -6.51 1.89E-10 Box Plot
THCA rs9621566 chr22:33187010 C/T NOL12 chr22:38077680-38089485:+ -0.57 -8.76 3.34E-17 Box Plot